Using FSL

This KB Article References: High Performance Computing
This Information is Intended for: Guests, Instructors, Researchers, Staff
Created: 08/04/2017 Last Updated: 05/15/2024

Current Version

FSL 5.0.10 is available on SeaWulf as a module.  This can be accessed by:

module load fsl/5.0.10

 

FDT Submission Scripts

For FDT submission scripts you must set the FSLMACHINELIS environment variable with the following command:

export FSLMACHINELIS=awk 'NR%2{{printf "%s ",$0;next;}}1' $SLURM_NODELIST

 

See https://fsl.fmrib.ox.ac.uk/fsl/fslwiki for more info.

 

Article Topic
Modules